Escherichia coli
Shiga toxin-producing Escherichia coli (EHEC) strain EL361 (isolate 361.1, serogroup O103) was recovered from a comminuted pork product sampled at a slaughter/processing facility in FSIS Region 2 on June 17, 2020. Genomic DNA was extracted using the Monarch HMW DNA Extraction Kit and sequenced with Oxford Nanopore long-read technology. Genome assembly was performed with Flye v2.9.3 and annotated using the NCBI Prokaryotic Genome Annotation Pipeline (PGAP).
strain
EL361
isolate_name_alias
361.1
collected_by
USDA
collection_date
2020-06-17
geo_loc_name
USA: (region 2)
isolation_source
swine
lat_lon
N/A
BioSampleModel
Pathogen.env