uncultured Arcobacter sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic run SRR2018010 of study SRP058294.
ENA first public
2025-05-29
INSDC center name
EMG
INSDC status
public
Submitter Id
SRR2018010_binner123_Refined_3
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes_v3.14.1
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v1.0.0
broad-scale environmental context
marine sediments
broker name
EBI-EMG
collection date
2011-10-01
completeness score
100
completeness software
CheckM2_v1.0.1
contamination score
0.02
environmental medium
sediments
geographic location (country and/or sea)
Germany
geographic location (latitude)
53.73585000
geographic location (longitude)
7.69905000
investigation type
metagenome-assembled genome
isolation_source
marine sediment metagenome
local environmental context
tidal flat sediments
metagenomic source
marine sediment metagenome
project name
Identifying potential metabolic interactions between Lenisia limosa and it's epibiotic Arcobacter
sample derived from
SAMN03396259
sample name
SRR2018010_binner123_Refined_3
scientific_name
uncultured Arcobacter sp.
sequencing method
Illumina MiSeq
taxonomic identity marker
multi-marker approach