Peptoniphilus sp.
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome generated from the metagenomic sample SRS1101286 of study SRP064400.
assembly software
missing: third party data
broad-scale environmental context
host-associated habitat
collection date
2010-09-30
sample derived from
SRS1101286
geographic location (longitude)
-73.63000000
binning parameters
missing: third party data
contamination score
2.05
completeness software
CheckM2_v1.1.0
geographic location (country and/or sea)
Canada
binning software
missing: third party data
organism
Peptoniphilus sp.
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
taxonomic identity marker
multi-marker approach
completeness score
97.16
environmental medium
stool
geographic location (latitude)
45.50000000
scientific_name
Peptoniphilus sp.
investigation type
metagenome-assembled genome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
Using whole-metagenome shotgun sequencing, we examined the diversity and composition of the fecal microbiota in a prospective cohort study of 98 hospitalized patients.
sequencing method
missing: third party data
isolation_source
human gut metagenome