Bacillota bacterium
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome generated from the metagenomic sample ERS473186 of study ERP005989.
assembly software
missing: third party data
broad-scale environmental context
human-associated habitat
collection date
2008/2010
sample derived from
ERS473186
geographic location (longitude)
-3.70376587
binning parameters
missing: third party data
contamination score
1.64
completeness software
CheckM2_v1.1.0
geographic location (country and/or sea)
Denmark
binning software
missing: third party data
organism
Bacillota bacterium
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
taxonomic identity marker
multi-marker approach
completeness score
70.63
environmental medium
faeces
geographic location (latitude)
40.41663279
scientific_name
Bacillota bacterium
investigation type
metagenome-assembled genome
local environmental context
human gut
metagenomic source
human gut metagenome
project name
The gastrointestinal tracts of mammalians are sterile in utero and colonized by microorganisms immediately after delivery. The subsequent development of the infant gut microbiota involves a complex succession of microbes, driven by factors such as gestational age, mode of delivery, antibiotic use, hygiene, geographical zone and type of feeding.
sequencing method
missing: third party data
isolation_source
human gut metagenome