16S V4 amplicon, tomato rhizosphere, Phi_Foliar, T3, pot 26
soil metagenome
Compartment: Rhizosphere; Soil: A; Treatment: Phi_Foliar; Timepoint: T3; Pot: 26; Replicate: 1
collection_date
2023-02
env_broad_scale
agricultural ecosystem [ENVO:01001245]
env_local_scale
rhizosphere [ENVO:00005801]
env_medium
rhizosphere soil [ENVO:00005801]
geo_loc_name
Ethiopia: Addis Ababa
host
Solanum lycopersicum
lat_lon
9.03738 N 38.83794 E
chem_administration
potassium phosphite 1.25%, foliar spray, weekly for 6 weeks
collection_method
sterile spoon for soil; sterile gloves for plant tissue
depth
0-10 cm
growth_facil
field
host_common_name
tomato
host_life_stage
vegetative
host_subspecf_genlin
cultivar:Melkasholla
host_taxid
4081
isolation_source
root-adhering rhizosphere soil
perturbation
Phi_Foliar
plant_growth_med
soil [ENVO:00001998]
plant_struc
root [PO:0009005]
samp_collect_device
sterile disposable plastic spoon
samp_mat_process
DNA extraction with DNeasy PowerSoil Kit (Qiagen)
samp_size
25 g
samp_store_temp
-20 C
pot_number
Pot_26
compartment
Rhizosphere
soil_type
Soil_A
biological_replicate
Rep_1
timepoint
T3
treatment_arm
Phi_Foliar
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.plant-associated