LNEN206_TU
Homo sapiens
Protocols: Formalin-fixed, paraffin-embedded (FFPE) tumour tissues were collected at diagnosis during surgical resection from contributing centres. Patients provided informed consent for tissue collection and its use in histopathological and molecular analyses (including somatic and germline whole-genome sequencing), as well as for the collection of de-identified clinical data. This study was approved by the International Agency for Research on Cancer Ethics Committee (project number 19-07). Each sample was placed on a 10x Genomics Visium slide followed by deparaffinisation, H&E staining and decrosslinking steps, according to 10x Genomics guidelines. Human probes targeting approximately 18,000 genes were hybridised overnight on the slides and captured on each spot after ligation between the LHS and RHS probes. Libraries were produced for each sample following 10x Genomics protocols.
ENA first public
2026-05-22
INSDC center name
International Agency For Research on Cancer (IARC)
INSDC status
public
Submitter Id
E-MTAB-17055:LNEN206_TU
age
72
broker name
ArrayExpress
cell type
lung cancer cell
collection date
not collected
common name
human
developmental stage
adult
disease
Typical Carcinoid Tumor
geographic location (country and/or sea)
not collected
individual
LNEN206
isolate
not applicable
organism part
lung
position_on_slide
Middle
sample name
E-MTAB-17055:LNEN206_TU
sample_id
LNEN206
sampling_site
lung - distal
scientific_name
Homo sapiens
sex
female
slide_serial_number
V12A25-373-A1
storage_state
FFPE
tissue_section_thickness
5