healthy Pinus thunbergii stem endophytic microbiome sample JK_3_HSs
plant metagenome
BioSample package
MIMARKS: survey, plant-associated; version 6.0
host
Pinus thunbergii
host_taxid
139271
host_common_name
Japanese black pine
host_disease
healthy
disease_stage
healthy tree without detectable pine wood nematodes
infection_status
Healthy
pinewood_nematode_detection
pine wood nematode not detected
host_tissue_sampled
stem
tissue
Stem
isolation_source
surface-sterilized stem tissue from Pinus thunbergii
biological_replicate
3
experimental_group
HTS
collection_date
not provided
geo_loc_name
China: Shandong, Weihai
lat_lon
not provided
env_broad_scale
terrestrial biome [ENVO:00000446]
env_local_scale
mixed pine plantation
env_medium
surface-sterilized pine tissue
biotic_relationship
symbiont
samp_collect_device
sterile collection bag
samp_store_temp
-80 C
samp_mat_process
surface sterilized; final rinse culture and PCR negative; DNA extracted with MagAttract PowerSoil Pro DNA Kit
sequencing_center
Shanghai Majorbio Bio-Pharm Technology Co., Ltd.
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.plant-associated