MIMAG Metagenome-assembled genome sample from Acetobacteraceae bacterium SBL_JL2023 abba_bin.68.orig
Acetobacteraceae bacterium
MIMAG medium-quality draft MAG racovered from phyllosphere metagenome samples from Eastern Canada, classified as Acetobacteraceae bacterium
16s recovered
No
16s recovery software
DRAM;v1.5.0
ENA first public
2026-02-18
INSDC center name
Kembel lab UQAM
INSDC status
public
Submitter Id
SBL_JL2023_abba_bin.68.orig
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly_software
metaSPAdes;3.15.4;--only-assembler, default parameters otherwise
binning parameters
Coverage and kmer
binning software
MaxBin 2.0;v2.2.6, MetaBAT 2;v2.12.1, CONCOCT;v1.0.0
broad-scale environmental context
temperate mixed forest biome [ENVO:01000212]
collection date
2023-07
completeness score
90.91
completeness software
CheckM;v1.2.1
contamination score
1.50
environmental medium
leaf epidermis [PO:0006016]
geographic location (country and/or sea)
Canada
geographic location (latitude)
+45.99
geographic location (longitude)
-73.99
isolation_source
Leaf surface of balsam fir (Abies balsamea) from Eastern Canada
local environmental context
phyllome [PO:0006001]
metagenomic source
phyllosphere metagenome
number of standard tRNAs extracted
36
project name
Temperate forest phyllosphere metagenome assembly
sample derived from
ERS27090401-ERS27090405
sample name
SBL_JL2023_abba_bin.68.orig
scientific_name
Acetobacteraceae bacterium
tRNA extraction software
DRAM;v1.5.0
taxonomic identity marker
Multi-marker approach