A draft metagenome-assembled genome of Dehalogenimonas sp. MAG_dhgm_Z1 recovered from the metagenome of Trichloroethylene anaerobic dechlorination consortium
Dehalogenimonas sp.
The consortium is capable of completely reductively dechlorinate TCE to ethene, and Dehalogenimonas sp. accounted for 74.7% in the microbial community.
ENA first public
2026-01-21
INSDC center name
SJTU
INSDC status
public
Submitter Id
MAG_dhgm_Z1
assembly quality
High-quality draft genome
assembly software
MEGAHIT: v1.2.9; default parameters
binning parameters
Initial binning performed in anvi'o v8 using CONCOCT, MetaBAT2, and MaxBin2 on merged coverage profiles; bins were integrated with DAS Tool (DIAMOND search engine) using 20 threads, followed by manual curation based on differential coverage, GC content, and single-copy marker genes
binning software
CONCOCT:v1.1.0, MaxBin2:v2.2.7, MetaBAT2:v2.12.1, DASTool: v1.1.7
broad-scale environmental context
ENVO:01000254 → contaminated site biome
collection date
2023-03
completeness score
%97.18
completeness software
anvio-8
contamination score
%1.41
environmental medium
ENVO:00001998 → soil
geographic location (country and/or sea)
China
geographic location (latitude)
31.8311
geographic location (longitude)
31.8311
isolation_source
Trichloroethylene contaminated soil
local environmental context
ENVO:00001998 → soil
metagenomic source
Anaerobic trichloroethene reductive dechlorination enrichments
project name
PRJEB104910
sample derived from
trichloroethylene contaminated soil
sample name
MAG_dhgm_Z1
scientific_name
Dehalogenimonas sp.
taxonomic identity marker
Concatenated single-copy core genes, GTDB-Tk marker genes