diseased Pinus thunbergii root endophytic microbiome sample BX_1_HSg
plant metagenome
BioSample package
MIMARKS: survey, plant-associated; version 6.0
host
Pinus thunbergii
host_taxid
139271
host_common_name
Japanese black pine
host_disease
pine wilt disease
disease_stage
mid-to-late stage naturally infected tree
infection_status
Diseased
pinewood_nematode_detection
>100 nematodes per gram dead wood; Bursaphelenchus xylophilus confirmed by PCR
host_tissue_sampled
root
tissue
Root
isolation_source
surface-sterilized root tissue from Pinus thunbergii
biological_replicate
1
experimental_group
DTR
collection_date
not provided
geo_loc_name
China: Shandong, Weihai
lat_lon
not provided
env_broad_scale
terrestrial biome [ENVO:00000446]
env_local_scale
mixed pine plantation
env_medium
surface-sterilized pine tissue
biotic_relationship
symbiont
samp_collect_device
sterile collection bag
samp_store_temp
-80 C
samp_mat_process
surface sterilized; final rinse culture and PCR negative; DNA extracted with MagAttract PowerSoil Pro DNA Kit
sequencing_center
Shanghai Majorbio Bio-Pharm Technology Co., Ltd.
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.plant-associated