Bacillus altitudinis
Bacillus altitudinis GG-22 isolated from the phyllosphere of healthy tomato fruit in an organic field (37.321560, 3.449636; ~658 m a.s.l.). Draft genome 3.84 Mb, 41.23 % GC, no plasmids, four prophages. Encodes siderophores (schizokinen, bacillibactin) and lipopeptides (fengycin, lichenysin). Displays in vitro antagonism against V. dahliae, F. oxysporum and Pythium spp., with limited activity against phytopathogenic bacteria.
strain
GG-22
collection_date
2016
env_broad_scale
Agricultural ecosystem [ENVO:00000077]
env_local_scale
Plant-associated environment [ENVO: 01001001]
env_medium
Fruit or fruit product [FOODON: 03400143]
geo_loc_name
Spain: Granada
host
Solanum lycopersicum
isol_growth_condt
Tryptone Soy Agar (TSA), 25 C, aerobic, 48 h incubation
lat_lon
37.321560 N 3.449636 W
num_replicons
1
ref_biomaterial
Primary publication
air_temp_regm
Mediterranean temperate climate, mean annual air temperature ~15 C
altitude
658 m
antibiotic_regm
None
biol_stat
Healthy plant
biotic_relationship
symbiont
chem_administration
No chemical treatment applied
chem_mutagen
None
climate_environment
Mediterranean climate
collection_method
Swabbing of fruit surface with sterile cotton swab
depth
0 m
elev
658 m
encoded_traits
Siderophore production (schizokinen, bacillibactin); lipopeptides (fengycin, lichenysin); phosphate & potassium solubilization; heavy metal detoxification; vitamin B1/B2/B5/B9 biosynthesis; biofilm formation; spore formation; antifungal activity
estimated_size
3.84 Mb
extrachrom_elements
None detected (no plasmids; four integrated prophages)
fertilizer_regm
None (organic orchard)
fungicide_regm
None (organic orchard)
gaseous_environment
Ambient air
growth_facil
field (organic orchard)
growth_hormone_regm
None
herbicide_regm
None
host_common_name
Tomato
host_life_stage
mature, fruiting plant
host_phenotype
healthy
host_taxid
4081
isolation_source
phyllosphere of tomato fruit (Solanum lycopersicum)
light_regm
natural sunlight
oxy_stat_samp
aerobic
pathogenicity
non-pathogenic to host plant; shows in vitro antifungal and anti-oomycete activity
pesticide_regm
none (organic orchard)
plant_growth_med
Soil
plant_product
Fruit
plant_struc
fruit surface (exocarp)
radiation_regm
natural solar radiation
rainfall_regm
Mediterranean seasonal regime (not quantified)
rel_to_oxygen
aerobe
samp_collect_device
sterile cotton swab
samp_mat_process
fruit surface swab streaked on TSA incubated at 25 C for 48 h under aerobic conditions
source_material_id
GG-22
trophic_level
chemoheterotroph
BioSampleModel
MIGS.ba
BioSampleModel
MIGS/MIMS/MIMARKS.plant-associated