SR-NSD-5 rat colon fecal microbiota 16S rRNA V4 sample
collection_date
2025-10-03
env_broad_scale
animal-associated habitat [ENVO:01001032]
env_local_scale
colon [UBERON:0001155]
env_medium
feces [ENVO:00002003]
geo_loc_name
China: Sichuan Province, Chengdu
host
Rattus norvegicus
lat_lon
30.684305 N 103.803906 E
biol_stat
inbred line
collection_method
fecal samples from the colon collected after laparotomy
host_body_habitat
gastrointestinal tract
host_body_product
feces
host_common_name
rat
host_diet
normal salt diet (AIN76a)
host_disease
not applicable
host_genotype
Dahl salt-resistant rat
host_growth_cond
specific pathogen-free environment; humidity 50 +/- 10%; 12 h/12 h light cycle; temperature 20.0 +/- 2.0 degrees Celsius
host_phenotype
Dahl salt-resistant rat fed a normal salt diet
host_subject_id
SR-NSD-5
host_taxid
10116
host_tissue_sampled
colon
isolation_source
colon fecal sample
perturbation
normal salt diet for 6 weeks
samp_mat_process
fecal sample frozen in liquid nitrogen and stored at -80 degrees Celsius; DNA extracted using Cwbio DNA extraction kit; V4 region amplified with primers 515F/806R
samp_store_temp
-80 degrees Celsius
samp_vol_we_dna_ext
0.5 g
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated