RaymondF_2016__P23C0__bin.81
assembly software
metaspades
binning software
metabat2
organism
Clostridium sp. CAG:138
broad-scale environmental context
human-associated habitat
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
collection date
2011
sample derived from
ERR719867,ERR719866,ERR719865,ERR719864,ERR719863,ERR719861,ERR719859,ERR719858,ERR719857,ERR719854,ERR719852,ERR719849,ERR719862,ERR719860,ERR719856,ERR719855,ERR719853,ERR719851,ERR719850,ERR719848
geographic location (longitude)
-71.242796
taxonomic identity marker
Genome Taxonomy Database Toolkit (GTDB-Tk) 120 bacterial marker genes
binning parameters
--minContig 2000
completeness score
94
contamination score
1.3
environmental medium
feces
geographic location (latitude)
46.8032826
scientific_name
Clostridium sp. CAG:138
local environmental context
human gut
metagenomic source
human gut metagenome
project name
PRJEB123302
completeness software
checkm
geographic location (country and/or sea)
Canada
isolation_source
human feces