Yarrowia bubula CBS 12934 genome assambly
The genome of Yarrowia bubula strain CBS 12934 has been sequenced using Illumina Solexa technology with a shot-gun library and a mate pair library of 8 kb in average. The raw reads were trimmed with Trimmomatic and cutadapt. The assembly was done using SOAPdenovo2 with a kmer of 63. Two successive runs of GapCloser were used to close gaps. The current draft genome sequence is composed of 29 scaffolds larger than 5 kb (28 nuclear and a mitochondrial one), for a total size of the nuclear DNA of 20,901,952 bp with an N50 of 1,641,727 bp (4 scaffolds) and a G+C content of 46.8%.
ENA first public
2018-08-09
ENA last update
2021-08-02
External Id
SAMEA4824134
INSDC center alias
INRA UMR 1319
INSDC center name
INRA UMR 1319
INSDC first public
2018-08-09T17:03:22Z
INSDC last update
2021-08-02T15:16:52Z
INSDC status
public
Submitter Id
YABU0
sample name
YABU0
strain
CBS 12934
type-material
isotype of Yarrowia bubula