ENA-FIRST-PUBLIC
2023-01-03
ENA-LAST-UPDATE
2023-01-03
External Id
SAMEA14082089
INSDC center alias
EBI
INSDC center name
European Bioinformatics Institute
INSDC first public
2023-01-03T00:32:20Z
INSDC last update
2023-01-03T00:32:20Z
INSDC status
public
Submitter Id
SRR5457059_bin.50_CONCOCT_v1.1_MAG
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspadesv3.12.0
binning parameters
Default
binning software
CONCOCT v1.1
broker name
EMG broker account, EMBL-EBI
collection date
2013-09-29
completeness score
96.91
completeness software
CheckM
contamination score
1.11
environment (biome)
Engineered
environment (feature)
Engineered
environment (material)
Engineered
geographic location (country and/or sea)
Canada
geographic location (latitude)
51.1699
geographic location (longitude)
-116.1578
investigation type
metagenome-assembled genome
isolation_source
metagenome
metagenomic source
metagenome
project name
Microbial Dark Matter project phase II - stepping deeper into unknown territory
sample derived from
SAMN06266324
sample name
SRR5457059_bin.50_CONCOCT_v1.1_MAG
scientific_name
uncultured candidate division WPS-2 bacterium
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach