H2: mouse fecal microbiome, HSF
Fecal microbiome sample collected at sacrifice from a mouse exposed to high-frequency sleep fragmentation without DSS-induced colitis.
collection_date
not collected
env_broad_scale
host-associated biome
env_local_scale
mouse gastrointestinal tract
env_medium
fecal material [ENVO:00002003]
geo_loc_name
Taiwan: Taoyuan
host
Mus musculus
lat_lon
not collected
chem_administration
none
collection_method
Fecal sample collected from the opened colon at sacrifice
host_common_name
house mouse
host_disease
not applicable
host_sex
male
host_taxid
10090
isolation_source
fecal sample collected from the colon at sacrifice
perturbation
high-frequency sleep fragmentation for 12 hours/day during the light phase
samp_mat_process
stored frozen at -80 degrees Celsius until DNA extraction
samp_store_temp
-80 degrees Celsius
source_material_id
H2
experimental_group
HSF
dss_treatment
none
sleep_fragmentation
240 sweeps/hour for 12 hours/day during the light phase
raw_file_R1
TD23IAM09A0669_S29_L001_1.fq.gz
raw_file_R2
TD23IAM09A0669_S29_L001_2.fq.gz
BioSampleModel
MIMARKS.survey
BioSampleModel
MIGS/MIMS/MIMARKS.host-associated