Fram Strait/WSC water column MAG - FRAM_RAS_F4_12_1920_1-MAG_22
Metagenome-assembled genome generated from a water column sample collected in West Spitsbergen Current, Fram Strait - specifically derived from ERR12117716,ERS16474250
ENA first public
2024-10-09
INSDC center name
MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC status
public
Submitter Id
FRAM_RAS_F4_12_1920_1-MAG_22
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
Flye v2.9.1
binning parameters
Default settings
binning software
Metabat2 v2.15
broad-scale environmental context
marine pelagic biome [ENVO:01000023]
collection date
2019-12-04
completeness score
83.72
completeness software
CheckM v1.2.0
contamination score
0.66
depth
22.65
environmental medium
sea water [ENVO:00002149]
geographic location (country and/or sea)
Svalbard
geographic location (latitude)
79.02
geographic location (longitude)
6.97
isolation_source
seawater
local environmental context
marine photic zone [ENVO:00000209]
metagenomic source
marine metagenome
project name
FRAM_RAS_WSC_F4_metagenomes
sample derived from
ERR12117716,ERS16474250
sample name
FRAM_RAS_F4_12_1920_1-MAG_22
scientific_name
Candidatus Pseudothioglobus singularis
taxonomic identity marker
16S rRNA gene and multi-gene marker approach