Metagenome-assembled genome: SRP178699_co2_144
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR8437246,SRR8437277 of study SRP178705.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP178699_co2_144
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
94.93
completeness software
CheckM2;1.0.2;default
contamination score
3.97
environmental medium
aquatic
geographic location (country and/or sea)
Canada
geographic location (latitude)
49.68
geographic location (longitude)
-124.009
investigation type
metagenome-assembled genome
isolation_source
lake water metagenome
local environmental context
lake water biome
metagenomic source
lake water metagenome
project name
Saline water microbial communities from Sakinaw Lake, British Columbia, Canada
sample derived from
SAMN10350548,SAMN10350553
sample name
SRP178699_co2_144
scientific_name
uncultured Candidatus Saccharimonas sp.
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach