Metagenome-assembled genome: binchicken_co3_592
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR6183662,SRR6946416 of study SRP120194.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co3_592
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
SemiBin2;2.0.2;default
broad-scale environmental context
aquatic
collection date
not provided
completeness score
88.75
completeness software
CheckM2;1.0.2;default
contamination score
1.93
environmental medium
aquatic
geographic location (country and/or sea)
USA
geographic location (latitude)
47.1149
geographic location (longitude)
-88.5476
investigation type
metagenome-assembled genome
isolation_source
wetland metagenome
local environmental context
wetland biome
metagenomic source
wetland metagenome
project name
Peatland microbial communities from PEATcosm Experiment in MTU Mesocosm Facility, Houghton
sample derived from
SAMN07631776,SAMN08778604
sample name
binchicken_co3_592
scientific_name
uncultured Candidatus Saccharimonas sp.
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach