Metagenome-assembled genome: SRP263991_co7_910
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR11845623,SRR11845624,SRR11845625 of study SRP263991.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
SRP263991_co7_910
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
VAMB;3.0.2;default
broad-scale environmental context
aquatic
collection date
2016-06-06
completeness score
82.76
completeness software
CheckM2;1.0.2;default
contamination score
0.0
environmental medium
aquatic
geographic location (country and/or sea)
China
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
wastewater metagenome
local environmental context
wastewater biome
metagenomic source
wastewater metagenome
project name
The composting samples were collected from a full-scale livestock manure (swine and poultry) aerobic composting over 171 day. The wastewater samples of aerobic digestion were collected from three full-scale anaerobic digestion units (buried biogas digester, up-flow anaerobic sludge blanket and film covered biogas digester)
sample derived from
SAMN15014480,SAMN15014479,SAMN15014478
sample name
SRP263991_co7_910
scientific_name
uncultured Candidatus Saccharimonas sp.
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach