REMEI138_ass_metaspades_bin.106.clean
Metagenome-assembled genome from REMEI experiments metagenomes
ENA first public
2026-02-02
External Id
SAMEA115165063
INSDC center name
Institut de Ciencies del Mar
INSDC last update
2024-01-30T15:10:34Z
INSDC status
public
Submitter Id
ena-SAMPLE-TAB-30-01-2024-15:10:09:962-62199
assembly quality
Medium-quality draft. Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes v.3.15.10
binning parameters
SemiBin multi_easy_bin standard parameters
binning software
SemiBin2 v.1.5.1
broad-scale environmental context
Marine biome (ENVO_00000447)
collection date
2017
completeness score
79.63%
completeness software
CheckM v.1.2.1
contamination score
0%
environmental medium
saline water
geographic location (country and/or sea)
Mediterranean Sea
geographic location (latitude)
41.67
geographic location (longitude)
2.8
isolation_source
seawater
local environmental context
Mediterranean Sea biome (ENVO:01000047)
metagenomic source
seawater metagenome
project name
REMEI
sample derived from
ERS16173821-ERS16173886
sample name
ena-SAMPLE-TAB-30-01-2024-15:10:09:962-62199
scientific_name
Candidatus Puniceispirillum sp.
taxonomic identity marker
gtdb-tk bac120