Metagenome-assembled genome: binchicken_co173_75
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR5431133,SRR8449813 of study SRP103437.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co173_75
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
71.62
completeness software
CheckM2;1.0.2;default
contamination score
0.95
environmental medium
engineered
geographic location (country and/or sea)
not applicable
geographic location (latitude)
not provided
geographic location (longitude)
not provided
investigation type
metagenome-assembled genome
isolation_source
anaerobic digester metagenome
local environmental context
anaerobic digester biome
metagenomic source
anaerobic digester metagenome
project name
The metagenome of the anaerobic co-digestion consortia
sample derived from
SAMN06699085,SAMN10350574
sample name
binchicken_co173_75
scientific_name
uncultured Candidatus Saccharimonas sp.
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach