9634bca7-0036-4470-acfa-8c32e30c46ef-asg-MAGScoT_cleanbin_000006
16S recovered
Yes
16S recovery software
PROKKA (version 1.14.5)
ENA-FIRST-PUBLIC
2023-05-03T10:14:20Z
ENA-LAST-UPDATE
2023-11-21T13:59:47Z
External Id
SAMEA113399327
GAL
Geomar Helmholtz Centre
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC first public
2023-05-03T10:14:20Z
INSDC last update
2023-11-21T13:59:47Z
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
9634bca7-0036-4470-acfa-8c32e30c46ef
assembly quality
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly software
Hifiasm (version 0.16.1-r375)
binning parameters
coverage; graph; hic-mapping
binning software
DASTOOL (version 1.1.5); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR
broad-scale environmental context
aquatic biome
collected by
Manuel Maldonado
collecting institution
CEAB-CSIC
collection date
2021-02-01
completeness score
97.81
completeness software
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
contamination score
2.73
depth
14
environmental medium
adult sponge tissue
geographic location (country and/or sea)
Spain
geographic location (latitude)
41.67333
geographic location (longitude)
2.80314
geographic location (region and locality)
Girona|Blanes
habitat
rocky bottom
host life stage
adult
host scientific name
Petrosia ficiformis
host taxid
68564
identified by
Manuel Maldonado
identifier_affiliation
CEAB-CSIC
investigation type
metagenome-assembled genome
isolation_source
Sponge: Petrosia ficiformis
local environmental context
marine benthic biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
46
organism part
WHOLE ORGANISM
project name
ASG
relationship
beneficial
sample derived from
SAMEA113399216
sample name
9634bca7-0036-4470-acfa-8c32e30c46ef
scientific_name
Candidatus Kapabacteria bacterium
sequencing method
Pacbio Sequel II
specimen id
GHC0000184
specimen voucher
NOT PROVIDED
tRNA extraction software
PROKKA (version 1.14.5)
taxonomic classification
GTDB-TK (version 2.1.1); GTDB (release 207_v2)
taxonomic identity marker
taxonomic classification fully defined by topology
tolid
odPetFici3.Candidatus_Kapabacteria_1