Metagenome-assembled genome: binchicken_co271_125
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome assembled from the metagenomic runs SRR4236672,SRR5007151 of study SRP089274.
ENA first public
2024-12-11
INSDC center name
CMR
INSDC status
public
Submitter Id
binchicken_co271_125
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaSPAdes;3.15.4;default
binning parameters
coverage and kmer
binning software
MetaBAT2;2.15;default
broad-scale environmental context
engineered
collection date
not provided
completeness score
98.34
completeness software
CheckM2;1.0.2;default
contamination score
0.01
environmental medium
engineered
geographic location (country and/or sea)
Hong Kong
geographic location (latitude)
22.28
geographic location (longitude)
114.17
investigation type
metagenome-assembled genome
isolation_source
activated sludge metagenome
local environmental context
activated sludge biome
metagenomic source
activated sludge metagenome
project name
Metagenomics of anaerobic wastewater microbial communities to study anthropogenic carbon cycling
sample derived from
SAMN05720225,SAMN05720208
sample name
binchicken_co271_125
scientific_name
uncultured Candidatus Saccharimonas sp.
sequencing method
Illumina HiSeq 2500
taxonomic identity marker
multi-marker approach