HRS-bin1555-RIMVE-SM17-13sep23
HRS-bin1555-RIMVE-SM17-13sep23: MAG from freshwater Rimov Reservoir
ENA first public
2026-04-26
INSDC center name
BIOLOGY CENTRE CAS, INSTITUTE OF HYDROBIOLOGY
INSDC status
public
Submitter Id
HRS-bin1555-RIMVE-SM17-13sep23
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
MEGAHIT
binning parameters
coverage and kmer
binning software
MetaBAT2
broad-scale environmental context
freshwater lake biome
collection date
2023-09-13
completeness score
83.13
completeness software
CheckM
contamination score
1.2
environmental medium
water sample
geographic location (country and/or sea)
Czech Republic
geographic location (latitude)
48.8476353
geographic location (longitude)
14.4899261
isolation_source
Rimov Reservoir
local environmental context
pelagial
metagenomic source
freshwater metagenome
project name
PRJEB84054
sample derived from
ERS29259333
sample name
HRS-bin1555-RIMVE-SM17-13sep23
scientific_name
Candidatus Fonsibacter sp.
taxonomic identity marker
multi-marker approach