6ae6b667-389a-4a1f-bb52-61bbd958f943-asg-MAGScoT_cleanbin_000009
assembly software
metaMDBG
habitat
rocky bottom
broad-scale environmental context
aquatic biome
host scientific name
Axinella damicornis
collection date
2021-02-01
sample derived from
SAMEA115458491
geographic location (longitude)
2.80
binning parameters
coverage; graph; hic-mapping
contamination score
0.0
collected_by
Manuel Maldonado
tRNA extraction software
PROKKA (version 1.14.5)
number of standard tRNAs extracted
43
host sex
not applicable
specimen_id
GHC0000182
taxonomic classification
GTDB-TK (version 2.3.2); GTDB (release 214)
16S recovery software
PROKKA (version 1.14.5)
identified_by
Manuel Maldonado
completeness software
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
relationship
unknown
geographic location (country and/or sea)
Spain
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR
organism
uncultured candidatus Porisulfidus sp.
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
taxonomic identity marker
taxonomic classification defined by topology and ANI
host taxid
72671
completeness score
86.27
environmental medium
adult sponge tissue
geographic location (latitude)
41.67
scientific_name
uncultured candidatus Porisulfidus sp.
organism part
WHOLE ORGANISM
geographic location (region and locality)
Girona|Blanes
GAL_sample_id
NOT PROVIDED
host life stage
adult
identifier_affiliation
CEAB-CSIC
investigation type
metagenome-assembled genome
specimen_voucher
NOT PROVIDED
local environmental context
marine benthic biome
GAL
Geomar Helmholtz Centre
MAG coverage software
Minimap2 (version 2.24-r1122)
depth
14
metagenomic source
sponge metagenome
project name
ASG
sequencing method
Pacbio Sequel II
16s recovered
Yes
collecting institution
CEAB-CSIC
tolid
odAxiDami1.Porisulfidus_sp_2
isolation_source
Sponge: Axinella damicornis