ab307cb0-aeb7-456b-ad90-6c1998998bd9-asg-MAGScoT_cleanbin_000070
16S recovered
No
16S recovery software
PROKKA (version 1.14.6)
ENA first public
2025-04-22
GAL
Geomar Helmholtz Centre
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
ab307cb0-aeb7-456b-ad90-6c1998998bd9
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaMDBG (version 0.3)
binning parameters
coverage; graph
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15); MaxBin (version 2.2.7)
broad-scale environmental context
aquatic biome
collected_by
JACOB MUSSER
collecting institution
YALE UNIVERSITY
collection date
2024-02-12
common name
Mueller's freshwater sponge
completeness score
55.42
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
8.43
environmental medium
adult sponge tissue
geographic location (country and/or sea)
Germany
geographic location (latitude)
47.60
geographic location (longitude)
9.54
geographic location (region and locality)
Bodensee | Langenargen
habitat
Underside of wood ferry dock in Lake Constance
host life stage
juvenile
host scientific name
Ephydatia muelleri
host sex
not provided
host taxid
6052
identified_by
JACOB MUSSER
identifier_affiliation
YALE UNIVERSITY
investigation type
metagenome-assembled genome
isolation_source
Sponge: Ephydatia muelleri
local environmental context
marine biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
20
organism part
WHOLE ORGANISM
project name
ToL
sample derived from
SAMEA118088316
sample name
ab307cb0-aeb7-456b-ad90-6c1998998bd9
scientific_name
Candidatus Fonsibacter sp.
sequencing method
Pacbio Sequel II
specimen_id
GHC0000356
specimen_voucher
NOT COLLECTED
symbiont
N
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
ani_screen
tolid
odEphMuel3.Fonsibacter_sp_2