c1eeb6c7-43c6-49e4-b51b-8d6765c536df-asg-MAGScoT_cleanbin_000021
assembly software
metaMDBG
habitat
Reef
broad-scale environmental context
aquatic biome
host scientific name
Phyllospongia foliascens
collection date
2020-09-23
sample derived from
SAMEA115457859
geographic location (longitude)
147.70
binning parameters
coverage; graph; hic-mapping
contamination score
1.72
collected_by
NICOLE WEBSTER
tRNA extraction software
PROKKA (version 1.14.5)
number of standard tRNAs extracted
44
host sex
not collected
specimen_id
GHC0000113
taxonomic classification
GTDB-TK (version 2.3.2); GTDB (release 214)
16S recovery software
PROKKA (version 1.14.5)
identified_by
NICOLE WEBSTER
completeness software
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
geographic location (country and/or sea)
Australia
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7)
organism
uncultured candidatus Porisulfidus sp.
assembly quality
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
taxonomic identity marker
taxonomic classification defined by topology and ANI
host taxid
593584
completeness score
91.81
environmental medium
adult sponge tissue
geographic location (latitude)
18.91
scientific_name
uncultured candidatus Porisulfidus sp.
organism part
WHOLE ORGANISM
geographic location (region and locality)
Queensland | Great Barrier Reef | Davies Reef
GAL_sample_id
NOT PROVIDED
host life stage
adult
identifier_affiliation
AIMS
investigation type
metagenome-assembled genome
specimen_voucher
NOT PROVIDED
local environmental context
marine reef biome
GAL
Geomar Helmholtz Centre
MAG coverage software
Minimap2 (version 2.24-r1122)
depth
12.0
metagenomic source
sponge metagenome
project name
ASG
sequencing method
Pacbio Sequel II
16s recovered
Yes
collecting institution
AIMS
tolid
odCarFoli1.Porisulfidus_sp_1
isolation_source
Sponge: Carteriospongia foliascens