51b8e141-ae92-4274-8d96-aa68e9d70435-asg-MAGScoT_cleanbin_000080
16S recovery software
PROKKA (version 1.14.6)
16s recovered
Yes
ENA first public
2024-07-31
GAL
Geomar Helmholtz Centre
GAL_sample_id
NOT PROVIDED
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
51b8e141-ae92-4274-8d96-aa68e9d70435
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaMDBG (version 0.3)
binning parameters
coverage; graph; hic-mapping
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15); bin3C (version 0.3.3); MaxBin (version 2.2.7)
broad-scale environmental context
aquatic biome
collected_by
JADRANKA NAPPI
collecting institution
University of New South Wales, Sydney, Australia
collection date
2020-08-27
completeness score
79.32
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
7.37
depth
8.0
environmental medium
adult sponge tissue
geographic location (country and/or sea)
Australia
geographic location (latitude)
-33.99
geographic location (longitude)
151.23
geographic location (region and locality)
Sydney | Bare Island
habitat
Rocky reef
host life stage
adult
host scientific name
Cymbastela concentrica
host sex
hermaphrodite
host taxid
484451
identified_by
JADRANKA NAPPI
identifier_affiliation
University of New South Wales, Sydney, Australia
investigation type
metagenome-assembled genome
isolation_source
Sponge: Cymbastela concentrica
local environmental context
marine reef biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
37
organism part
WHOLE ORGANISM
project name
ASG
sample derived from
SAMEA115885654
sample name
51b8e141-ae92-4274-8d96-aa68e9d70435
scientific_name
uncultured candidatus Porisulfidus sp.
sequencing method
Pacbio Sequel II
specimen_id
GHC0000111
specimen_voucher
NOT PROVIDED
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
taxonomic novelty determined using RED
tolid
odCymConc1.Porisulfidus_sp_1