5bb7adec-c862-487d-94ba-523caffb22f0-asg-MAGScoT_cleanbin_000275
16S recovery software
PROKKA (version 1.14.6)
16s recovered
Yes
ENA first public
2024-08-22
GAL
Geomar Helmholtz Centre
GAL_sample_id
not provided
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
5bb7adec-c862-487d-94ba-523caffb22f0
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaMDBG (version 0.3)
binning parameters
coverage; graph; hic-mapping
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15); bin3C (version 0.3.3); MaxBin (version 2.2.7)
broad-scale environmental context
aquatic biome
collected_by
NICOLE WEBSTER
collecting institution
AIMS
collection date
2020-11-01
completeness score
73.02
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
0.0
depth
9.0
environmental medium
adult sponge tissue
geographic location (country and/or sea)
Australia
geographic location (latitude)
18.97
geographic location (longitude)
146.56
geographic location (region and locality)
Queensland | Great Barrier Reef | Havanna Island
habitat
Reef
host life stage
adult
host scientific name
Xestospongia bergquistia
host sex
not collected
host taxid
1088918
identified_by
NICOLE WEBSTER
identifier_affiliation
AIMS
investigation type
metagenome-assembled genome
isolation_source
Sponge: Xestospongia bergquistia
local environmental context
marine benthic biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
41
organism part
WHOLE ORGANISM
project name
ASG
sample derived from
SAMEA115947501
sample name
5bb7adec-c862-487d-94ba-523caffb22f0
scientific_name
Candidatus Saccharimonadales bacterium
sequencing method
Pacbio Sequel II
specimen_id
GHC0000118
specimen_voucher
not provided
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
taxonomic classification fully defined by topology
tolid
odXesBerg1.Saccharimonadales_2