Metagenome-assembled genome: DRR171478_bin_23774
This sample represents a Third Party Annotation (TPA) Metagenome-assembled genome generated from the metagenomic run DRR171478 of study DRP004793.
ENA first public
2026-04-10
INSDC center name
EMG
INSDC status
public
Submitter Id
DRR171478_bin_23774
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaspades_v3.15.5
binning parameters
default
binning software
MGnify-genomes-generation-pipeline_v2.0.0
broad-scale environmental context
human
broker name
EBI-EMG
collection date
2014
completeness score
84.33
completeness software
CheckM2_v1.0.1
contamination score
1.41
environmental medium
intestine
geographic location (country and/or sea)
Japan
geographic location (latitude)
35.66000000
geographic location (longitude)
139.76000000
investigation type
metagenome-assembled genome
isolation_source
human gut metagenome
local environmental context
digestive system
metagenomic source
human gut metagenome
project name
Total microbial community DNA was isolated from the fecal samples of Japanese patients who underwent colonoscopy at National Cancer Research Center. The study population contains health, early and advanced cancer stages.
sample derived from
SAMD00164757
sample name
DRR171478_bin_23774
scientific_name
Candidatus Nanosynbacter sp.
sequencing method
missing
taxonomic identity marker
multi-marker approach