3ac89c05-ee43-4245-b9ad-ae96be342318-asg-MAGScoT_cleanbin_000058
16S recovered
Yes
16S recovery software
PROKKA (version 1.14.5)
GAL
Geomar Helmholtz Centre
GAL_sample_id
not provided
INSDC center name
Tree of Life Programme
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
3ac89c05-ee43-4245-b9ad-ae96be342318
assembly quality
Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software
metaMDBG
binning parameters
coverage; graph; hic-mapping
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR
broad-scale environmental context
aquatic biome
collected by
NICOLE WEBSTER
collecting institution
AIMS
collection date
2020-11-01
completeness score
96.45
completeness software
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
contamination score
6.78
depth
9.0
environmental medium
adult sponge tissue
geographic location (country and/or sea)
Australia
geographic location (latitude)
18.97
geographic location (longitude)
146.56
geographic location (region and locality)
Queensland | Great Barrier Reef | Havanna Island
habitat
Reef
host life stage
adult
host scientific name
Xestospongia bergquistia
host sex
not collected
host taxid
1088918
identified by
NICOLE WEBSTER
identifier_affiliation
AIMS
investigation type
metagenome-assembled genome
isolation_source
Sponge: Xestospongia bergquistia
local environmental context
marine reef biome
metagenomic source
sponge metagenome
number of standard tRNAs extracted
49
organism part
WHOLE ORGANISM
project name
ASG
sample derived from
SAMEA114406366
sample name
3ac89c05-ee43-4245-b9ad-ae96be342318
scientific_name
Candidatus Binatia bacterium
sequencing method
Pacbio Sequel II
specimen id
GHC0000118
specimen voucher
not provided
tRNA extraction software
PROKKA (version 1.14.5)
taxonomic classification
GTDB-TK (version 2.1.1); GTDB (release 207_v2)
taxonomic identity marker
taxonomic classification defined by topology and ANI
tolid
odXesBerg1.Candidatus_Binatia_1