2ac8f909-beb7-4024-9be3-18111db1b52c-asg-MAGScoT_cleanbin_000108
16S recovery software
PROKKA (version 1.14.6)
16s recovered
Yes
ENA first public
2024-08-12
GAL
Queen Mary University of London
GAL_sample_id
not provided
INSDC center name
Tree of Life Programme
INSDC status
public
MAG coverage software
Minimap2 (version 2.24-r1122)
Submitter Id
2ac8f909-beb7-4024-9be3-18111db1b52c
assembly quality
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
assembly software
metaMDBG (version 0.3)
barcoding center
not provided
binning parameters
coverage; graph; hic-mapping
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15); bin3C (version 0.3.3); MaxBin (version 2.2.7)
broad-scale environmental context
aquatic biome
collected_by
Michael J Boyle
collecting institution
former Smithsonian Institute
collection date
2021-07-01
completeness score
95.6
completeness software
checkM (version 1.2.2); checkM_DB (release 2015-01-16)
contamination score
2.2
depth
0.5
elevation
0
environmental medium
adult annelid tissue
geographic location (country and/or sea)
USA
geographic location (latitude)
27.46
geographic location (longitude)
-80.31
geographic location (region and locality)
FLORIDA | FORT PIERCE | INDIAN LAGOON | MANGROOVE
habitat
between rock and dead oyster bed crevices
host life stage
adult
host scientific name
Themiste lageniformis
host sex
female
host taxid
216211
identified_by
Michael J Boyle
identifier_affiliation
Former Smithsonian Institute
investigation type
metagenome-assembled genome
isolation_source
Annelid: Themiste lageniformis
local environmental context
marine biome
metagenomic source
annelid metagenome
number of standard tRNAs extracted
54
organism part
WHOLE ORGANISM
original collection location
USA | FLORIDA | FORT PIERCE | INDIAN LAGOON | MANGROOVE
original geographic location (latitude)
27.471679
original geographic location (longitude)
-80.306737
project name
ASG
sample collection method
Manually
sample derived from
SAMEA115925830
sample name
2ac8f909-beb7-4024-9be3-18111db1b52c
scientific_name
Candidatus Eisenbacteria bacterium
sequencing method
Pacbio Sequel II
specimen_id
QMOUL0000300
specimen_voucher
NOT_PROVIDED
tRNA extraction software
PROKKA (version 1.14.6)
taxonomic classification
GTDB-TK (version 2.4.0); GTDB (release 214)
taxonomic identity marker
taxonomic novelty determined using RED
tolid
wgTheLage1.Eisenbacteria_2