PL-bin13-T510 MAG from Probe Lake consortium
Metagenome-assembled genome PL-bin13-T510 from the Probe Lake cyanobacterial consortium. This MAG is derived from source sample ERS29148269 (PL-bin13-T510). GTDB-Tk classification: d__Bacteria;p__Cyanobacteriota;c__Cyanobacteriia;o__Cyanobacteriales;f__Geitlerinemaceae;g__Sodalinema;s__Sodalinema gerasimenkoae. Completeness: 99.99%; contamination: 0.36%; relative abundance: 55.29%.
ENA first public
2026-08-24
INSDC center name
University of Calgary
INSDC status
public
Submitter Id
PL-bin13-T510-MAG
assembly quality
Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software
MetaMDBG v1.1
binning parameters
MetaWRAP bin_refinement with minimum completeness 50% and maximum contamination 10%
binning software
MetaWRAP bin_refinement; MetaBAT2
broad-scale environmental context
soda lake
collection date
2024-09-01
completeness score
99.99
completeness software
CheckM2
contamination score
0.36
environmental medium
alkaline soda lake microbial mat enrichment
geographic location (country and/or sea)
Canada
geographic location (latitude)
51.45
geographic location (longitude)
-121.39
isolation_source
cyanobacterial enrichment from Probe Lake soda lake microbial mat
local environmental context
microbial mat
metagenomic source
soda lake metagenome
project name
PRJEB108561
sample derived from
ERS29148269
sample name
PL-bin13-T510-MAG
scientific_name
Sodalinema gerasimenkoae
taxonomic identity marker
GTDB-Tk classification