isolate
SZUA-1180
isolation_source
Hydrothermal Plume
collection_date
2012-01-21
geo_loc_name
Atlantic Ocean:Mid Cayman Rise
sample_type
metagenomic assembly
lat_lon
18.54650166 N 81.71823333 W
derived-from
This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR2046238 SRR2046237 SRR2046221
assembly_method_and_version
MEGAHIT v1.1.2
completeness_estimated
73.6
contamination_estimated
2.7
quality_assessment_method_and_version
CheckM v1.0.7
environmental-sample
true
genome_coverage
87.93
mapping_method_and_version
Bowtie 2 v2.2.8
metagenome-source
hydrothermal vent metagenome
metagenomic
true
BioSampleModel
Microbe, viral or environmental