f8cba6c3-7e1b-4da5-9e71-6b9c0636047c-asg-MAGScoT_cleanbin_000006
assembly software
metaMDBG
habitat
marine, coldwater, rock wall
broad-scale environmental context
aquatic biome
host scientific name
Acanthascus dawsoni
collection date
2020-12-14
sample derived from
SAMEA115457903
geographic location (longitude)
-124.17
binning parameters
coverage; graph; hic-mapping
contamination score
1.26
collected_by
SALLY LEYS
tRNA extraction software
PROKKA (version 1.14.5)
number of standard tRNAs extracted
52
host sex
not collected
specimen_id
GHC0000128
taxonomic classification
GTDB-TK (version 2.3.2); GTDB (release 214)
16S recovery software
PROKKA (version 1.14.5)
identified_by
SALLY LEYS
completeness software
checkM (version 1.2.1); checkM_DB (release 2015-01-16)
geographic location (country and/or sea)
Canada
binning software
MAGScoT (version 1.0.0); MetaBat (version 2.15-15-gd6ea400); bin3C (version 0.3.3); MaxBin (version 2.7); MetaTOR
organism
uncultured candidatus Porisulfidus sp.
assembly quality
Single contiguous sequence without gaps or ambiguities with a consensus error rate equivalent to Q50 or better
taxonomic identity marker
taxonomic novelty determined using RED
host taxid
472225
completeness score
92.16
environmental medium
adult sponge tissue
geographic location (latitude)
49.30
scientific_name
uncultured candidatus Porisulfidus sp.
common name
boot sponge
organism part
WHOLE ORGANISM
geographic location (region and locality)
Edmonton | University of Alberta
GAL_sample_id
NOT PROVIDED
host life stage
adult
identifier_affiliation
University of Alberta
investigation type
metagenome-assembled genome
specimen_voucher
RD-OLP 01
local environmental context
marine benthic biome
GAL
Geomar Helmholtz Centre
MAG coverage software
Minimap2 (version 2.24-r1122)
depth
29.0
metagenomic source
sponge metagenome
project name
ASG
sequencing method
Pacbio Sequel II
16s recovered
Yes
collecting institution
University of Alberta
tolid
ohAcaDaws1.Porisulfidus_sp_1
isolation_source
Sponge: Acanthascus dawsoni