different ecological zones in the south china sea cold seep region Raw sequence reads
In the biodiverse cold seep landscapes of the South China Sea (SCS), defining species-specific habitats intersect to form distinct ecological zones, each harboring unique macrofaunal assemblages. These ecological zones are hypothesized to be pivotal in shaping the metabolic pathways and community structures of the local microorganisms. Yet, the depth of insight into the prokaryotic communities and their functional attributes within these zones remains scant. Addressing this knowledge gap, our work ventures into the heart of these ecological niches, from the surficial sedimentary layers to the profound depths. By leveraging a suite of sophisticated methods, including 16S rRNA and metagenomic sequencing, detailed chemical and isotopic diagnostics, we have demarcated the microbial domains within different ecological zones of SCS. Machine learning algorithms were instrumental in dissecting the complex interplay of abiotic forces and biotic adaptation, with a keen focus on untangling the metabolic intricacies fostered by prevalent geochemical gradients. Our discoveries signal a delicate equilibrium, where microbial community robustness coexists with, and indeed flourishes within, the variegated ecological settings of the cold seeps, highlighting their synergetic role in perpetuating elemental cycles. This study not only expands our comprehension of microbial ecodynamics but also accentuates the profound influence of ecological zones as architects of microbial diversity and metabolic innovation in marine sedimentary environments.