H69 cholangiocytes incubated with O. viverrini extracellular vesicles
This project aimed to perform an RNAseq analysis of H69 cells incubated under five different conditions: PBS, Opisthorchis viverrini (Ov) 120k extracellular vesicles (EVs), 15k OvEVs, grape-derived EVs, and H69-derived EVs. Three biological replicates were included for each condition. Cells were harvested and analyzed at two time points: 6 hours and 24 hours. Total RNA was extracted from each sample using TRIzol reagent (Invitrogen) and RNA quality, yield, and fragment size were assessed by capillary electrophoresis using an Agilent 2100 Bioanalyzer. Sequencing libraries were prepared using the TruSeq mRNA-seq library preparation protocol (Illumina) and sequenced on an Illumina NovaSeq 6000 S1 flow cell, generating 100 bp single-end reads