Low-coverage whole-genome sequencing of Diversity Outbred mice (n = 48, pilot) (house mouse)
48 DO mice (n = 24 males, n = 24 females; J:DO; RRID:IMSR_JAX:009376) were sequenced to approximately 1X coverage. Reads were then aligned and used for genotype imputation. Each genome was then reconstructed in terms of the DO founder strain haplotypes. Haplotype calls were then compared to those derived from array-based genotyping (Giga Mouse Universal Genotyping Array)