Single Cell Chromatin Accessibility Profiling on the mouse kidneys with ischemia-reperfusion injury
We performed single nucleus ATAC (snATAC-seq) to generate cell-type-specific chromatin accessibility atlas of the mouse kidneys with ischemia-reperfusion injury. The single nucleus RNA-seq of the same samples were previously published (GEO139107) Overall design: We performed single snATAC-seq of the mouse kidneys along a time course after ischemia-reperfusion injury (sham, 4 hr, 12 hr, 2 days, 14 days and 42 days after IRI).