Adaptive evolution of carbapenem-resistant Klebsiella pneumoniae: altered virulence and extensive persistence in the GI tract
This submission contains whole genome sequencing and RNA-Seq data from clinical Klebsiella pneumoniae isolates collected from a single patient. The study highlights the adaptive evolution of carbapenem-resistant K. pneumoniae (CRkp) within the host. Sequencing data were generated to investigate genomic and transcriptomic changes associated with within-host adaptation.