Comparative transcriptomics and epigenomics of wild-type and JAG mutant in Capsella
Comparative multi-omics analysis of Capsella rubella wild-type and JAGGED mutant lines. The dataset includes:1. RNA-seq: Transcriptome profiles from 17 samples (wild-type, jag mutant, C2H2-GFP-L2, CrMSI2:GFP, CrMSI3:GFP)2. CUT&amp;Tag: JAG transcription factor binding sites in JAG:GFP plants and genome-wide histone modification profiles (H3K18ac, H3K27me3, H3K4me1, H3K4me3, H3K9ac, H3K14ac, H3K23ac, H3K27ac)3. ATAC-seq: Chromatin accessibility maps from wild-type and JAG:GFP plantsThis resource enables investigation of JAG-mediated gene regulatory networks, identification of direct target genes, and characterization of epigenetic changes associated with JAG mutation. Data are valuable for comparative studies of plant development and transcription factor function across Brassicaceae species.