The Role of Mediator Subunit MED30 in Licensing the c-Myc Oncogenic Program [RNA-seq]
Despite extensive functional and structural investigation of the Mediator complex, the basis for selective functional requirements for specific Mediator subunits for the actions of specific DNA binding transcription factors remain incompletely understood.  Here, we report the MED30 subunit of Mediator, one of the core subunits maintaining the complex, plays a critical role in regulating the MYC transcription program in cancer cells. This is consequent to MED30 being required for stabilizing Mediator complex and MYC binding on the genome, involving low-affinity hydrophobic interaction functions of the MYC N-terminal Intrinsic Disordered Region (IDR). A mutational screen reveals that mutations in critical residues in the MYC coiled-coil domain structurally adjacent to the IDR of MED30 strongly inhibit tumor growth, even in the presence of wild-type MED30, mimicking the effects of MED30 deletion. This study provides new insights into the principles governing the Mediator complex actions MYC-related biological processes. Overall design: To examine the transcriptome influence of depleting difference mediator subunit, shRNAs target MED1,MED20, MED30 or non-target Ctrl were packaged into lenti-virus and infected into Mia PaCa-2 cells, and total RNAs were extracted two days post infection. MED30 wild-type or mutant overexpression comparing to knockdown RNA seq in Mia PaCa-2 was performed with 0.5ug/ml doxycycline-induced teton shRNA or cDNA overexpression, and total RNAs were extracted two days post Dox induction. All shRNAs were packaged in lentivirus and infected into cells.