MATR3 ChIP-seq analysis from C2C12 differentiated myotubes upon pCharme lncRNA knockdown
Identification of pCharme dependent Matrin3  chromatin binding sites by ChIP-seq analysis performed in pCharme depleted vs control myoutubes Overall design: C2C12 cells were transfected wirth GAP-scr vs GAP-1 LNA gapmers against pCharme lncRNA and induced to differentiate. Cells were collected at day2 upon the induction of differentiation, the chromatin was collected and sonicated, and ChIP-Seq was performed.