Single cell transcriptomics of the rabbit caecum epithelium
Transcriptomic data from single cells isolated from the caecum epithelium from 25-day old rabbits exclusively suckling (milk group) or suckling and ingesting solid food (milk+solid group). The aim of this protocol was to use single cell transcriptomics to identify how the ingestion of solid food alters gene expression in each cell type of the caecum epithelium in suckling rabbits. This protocol is part of the project METABOWEAN (Gut microbiota-derived metabolites: natural products to promote epithelial barrier maturation at the suckling-to-weaning transition) funded by the French National Research Agency (ANR-21-CE20-0048).Data producers reserve the right to make the first publication of a global analysis of this data. Any use of this dataset must comply with the FAANG data sharing principles. The dataset is published under the CC BY SA 4.0 (Creative Commons) license. If you are unsure if you are allowed to publish on this dataset, please contact martin.beaumont@inrae.fr, nathalie.vialaneix@inrae.fr or faang@iastate.edu to enquire. The full guidelines can be found at http://www.faang.org/data-share-principle”.