Long read sequencing (B.subtilis, S. aureus, A. pittii and Y. enterocolitica)
Tetracycline-resistant B. subtilis (CNVs 14.86 and 4.85), chloramphenicol-resistant Y. enterocolitica (CNV 65.3), cefepime-resistant S. aureus (CNV 4.65), and erythromycin-resistant A. pittii (CNV 4) were selected for long-read sequencing.