Oxford Nanopore Technologies MinION sequencing as a novel short amplicon metabarcoding tool
We tested the utility of Oxford Nanopore Technologies MinION long read sequencing for in situ short read amplicon sequencing of mitochondrial COI mini-barcodes. We identified host species and diet composition by sequencing droppings collected from five individual Irish brown long-eared bat (Plecotus auritus) roosts.