Sicista trizona, genome assembly, mSicTri, alternate haplotype
This project provides the alternate haplotype of the Hungarian birch mouse (Sicista trizona trizona) sequenced from a male individual sampled at the 'Borsodi-Mezoség' Landscape Protection Area, Hungary. The assembly includes all (hypothetical) autosomes and none of the (hypothetical) sex chromosomes. The assembly was generated from PacBio HiFi reads, supplemented with Arima HiC data. For primary assembly, we used hifiasm, and scaffolding was done by YASH. This was followed by manual curation in PretextView.