The influence of nutrient addition and fish grazing on the dynamics and composition of microbial communities in water and fish guts during mesocosm experiments conducted in a tropical freshwater lagoon (Lagoon Aghien, Ivory Coast) Targeted loci envir
16S rRNA V3-V4 variable region sequences of free-living and attached bacterial communities sampled in water and in gut fish during aquatic mesocosm experiments performed in a freshwater lagoon, Lagoon Aghien in Ivory Coast. Illumina 16S sequences are provided without primers and barcodes.