GWAS_of_GBS_carriage_and_disease_-sc-5981
GWAS_of_GBS_carriage_and_disease_
Whole genome sequencing of approximately 1300 Streptococcus agalactiae isolates from maternal carriage in the Netherlands, to compare the population genetics of the invasive and colonising strains This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/
Group B Streptococcus (GBS), also known as Streptococcus agalactiae, is a leading cause of neonatal sepsis and meningitis. It is estimated that around 20% of pregnant women carry GBS asymptomatically. Intrapartum GBS transmission from a colonized mother can lead to colonisation in a neonate, which in turn can result in invasive disease. Implementation of disease prevention guidelines recommending intrapartum antibiotic prophylaxis (IAP) has been shown to reduce the incidence of the disease in newborn babies. However, in some countries such as the Netherlands and the UK, the opposite outcome has been observed, with a steady rise in disease incidence over time. Improved IAP guidelines or new prevention strategies are urgently needed. This can be supported by a better understanding of GBS genetic diversity and genetic association with disease. We previously performed WGS analysis of a nationwide collection of 1345 invasive GBS from infections in infants aged 0 â€“ 89 days that occurred in the Netherlands between 1987 and 2016. We established a high level of genetic discrimination between isolates and found a correlation between the increase in disease incidence over time and expansion of specific clonal groups of GBS. However, as we were limited to the analysis of invasive isolates only, it remains unclear if these expanding clones increased in prevalence only among invasive isolates, or if they are also common among carriage isolates. To address this, we will perform a WGS analysis on a collection of GBS isolates from maternal carriage in the Netherlands, to compare the population genetics of the invasive and colonising GBS.