PRJNA528098
RNA Sequencing analysis of Enterococcus faecalis in a mouse model of inflammatory bowel diseases colonized with a simplified microbial consortium
In this study, we characterized the gene expression profile of Enterococcus faecalis as part of a simplified microbial consortium based on human strains (SIHUMI). We purified Enterococcus faecalis cells from the colon content of SIHUMI colonized healthy wild type (n=6) and inflamed IL-10 deficient mice (n=13) using immunomagnetic separation and performed RNA sequencing .