ena-STUDY-IFAPA CENTRO DE CHURRIANA (MÁLAGA)-26-03-2018-08:02:07:268-2537
Mannose-6-P-isomerase is a candidate gene for variation in L-AA content
To validate genes and/or identify candidate genes underlying three mQTL affecting L-AA content in strawberry, we aimed to identify differentially expressed genes (DEG) between two bulked RNA samples from F1 lines contrasting in L-AA content. First, transcriptomes were obtained by Illumina sequencing using three biological replicates of each pool. An average of 33.97 million reads was generated for each sample, ranging from 30.83 to 36.75 M. An average of 32.79 M reads-pairs passed the filter cutoff and 79.49% were mapped to the reference F. vesca v4.0.a1 genome assembly and annotation
To validate genes and/or identify candidate genes underlying three mQTL affecting L-AA content in strawberry, we aimed to identify differentially expressed genes (DEG) between two bulked RNA samples from F1 lines contrasting in L-AA content. First, transcriptomes were obtained by Illumina sequencing using three biological replicates of each pool. An average of 33.97 million reads was generated for each sample, ranging from 30.83 to 36.75 M. An average of 32.79 M reads-pairs passed the filter cutoff and 79.49% were mapped to the reference F. vesca v4.0.a1 genome assembly and annotation