PRJNA564500
Implementation of Genomic Variant Calling Using GATK4, SPARK, WDL, CROMWELL and DOCKER Over Simulated Ebola NGS Dataset.
Genomic variant calling is automated using workflows written into WDL script. There are different scripts to execute genomic variant calling over non-SPARK, SPARK platform as well as DOCKER as runtime. Simulated ebola RNASEQ reads are used to benchmark the execution.