2018_cichlid_RNA-sc-5432
2018_cichlid_RNA
This covers RNAseq sequencing from three subprojects within the cichlid sequencing project. First we have 120 samples from two closely related Copadichromis species being studied for rapid adaptation between two locations (2 locations x 5 tissues x 6 replicates x 2 species). Next we will have 4 tissues from 144 samples of Astatotilapia calliptera from Lake Massoko for eQTL analysis. These are from a subset of the samples used for trait association QTL studies. Finally also from Lake Massoko A. calliptera we have 3 x 20 samples from the lower pharyngeal jaw, which is highly variable and believed also to be under selection between ecotypes.  This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/  The Malawi cichlid samples were collected ethically under prescribed permits, and the results and data are published under an Access and Benefit Sharing agreement with the Government of Malawi.  We acknowledge the contributions of the Malawi Department of Fisheries and the Government of Malawi for their assistance in the collection of samples and the generation of data and results. This data is made available on an open access basis for research use only. Any person who wishes to use this data for any form of commercial purpose must first enter into a commercial licensing and benefit sharing arrangement with the Government of Malawi.
This covers RNAseq sequencing from three subprojects within the cichlid sequencing project. First we have 120 samples from two closely related Copadichromis species being studied for rapid adaptation between two locations (2 locations x 5 tissues x 6 replicates x 2 species). Next we will have 4 tissues from 144 samples of Astatotilapia calliptera from Lake Massoko for eQTL analysis. These are from a subset of the samples used for trait association QTL studies. Finally also from Lake Massoko A. calliptera we have 3 x 20 samples from the lower pharyngeal jaw, which is highly variable and believed also to be under selection between ecotypes.