ena-STUDY-JIC-17-06-2020-15:25:01:902-531
Genome-wide mRNA-seq for AvrRps4 induced gene profile in sard1/cbp60g (gh) mutant
This is a data-set for genome-wide mRNA sequencing in gh mutant versus wild-type (WT) Col-0. Total RNA samples from infected leaves are collected from 5-week-old Arabidopsis plants growing in B5102 at 4 hours after infiltration with Pf0-1: AvrRps4-WT versus AvrRps4-KRVY135-138AAAA mutant. Untreated samples are also included as another set of controls. The total RNAs are processed by BGI for cDNA library prep and sequenced in BGISEQ-500 platform with 50bp SE reads as the output. Data here are clean reads with barcodes and adaptor trimmed, so are ready for downstream data analysis.
This is a data-set for genome-wide mRNA sequencing in gh mutant versus wild-type (WT) Col-0. Total RNA samples from infected leaves are collected from 5-week-old Arabidopsis plants growing in B5102 at 4 hours after infiltration with Pf0-1: AvrRps4-WT versus AvrRps4-KRVY135-138AAAA mutant. Untreated samples are also included as another set of controls. The total RNAs are processed by BGI for cDNA library prep and sequenced in BGISEQ-500 platform with 50bp SE reads as the output. Data here are clean reads with barcodes and adaptor trimmed, so are ready for downstream data analysis.