GSE111490
Setaria viridis small RNAs from panicle tissues
A total of 18 libraries from Setaria viridis were constructed using the Illumina TruSeq sample preparation method. We used two biological replicate libraries from the leaf, whole panicles (inside leaf sheath), whole panicles (coming out of leaf sheath), whole panicles (completely out of leaf sheath), whole panicles (completely out of leaf sheath, after pollination), spikelet (inside leaf sheath), spikelet (coming out of leaf sheath), and spikelet (completely out of leaf sheath). Overall design: We analyzed 21- and 24-nt phasiRNAs in Setaria (Setaria viridis) to use as a cross-species test for a machine learning classifier. We used two biological replicate libraries constructed from the leaf, whole panicle (inside leaf sheath), whole panicle (coming out of leaf sheath), whole panicle (completely out of leaf sheath) , whole panicle (completely out of leaf sheath,after pollination), spikelet (inside leaf sheath), spikelet (coming out of leaf sheath), and spikelet (completely out of leaf sheath).