PRJNA679828
Whole-genome random paired-end sequencing of pecan Lakota x Oaxaca seedling used in linkage mapping
Paired-end reads generated by HudsonAlpha of whole-genome DNA from 143 full-sibling progeny of pecan cultivars Lakota and Oaxaca. Reads were trimmed, aligned to reference genome, and used to call segregating SNP variants. SNPs identified in this way were subsequently used to create linkage maps and perform linkage based QTL mapping of phylloxera resistance.