ena-STUDY-Universite auvergne-30-08-2018-12:56:02:514-417
Comparison of enterovirus sequences from patients and wastewater during one year of wastewater surveillance in Clermont-Ferrand (France)
Raw wastewater were sampling during one year (October 2014-october 2015) in the wastewater treatment plant of Clermont-Ferrand (central France) twice a month. After concentration, the gene coding the major capsid protein was partially amplified and sequenced by deep-sequencing. Sequences were grouped into OTU, and representative sequences of these OTUs were compared to enterovirus sequences from hospitalized patients during the same period and in the same city.
Raw wastewater were sampling during one year (October 2014-october 2015) in the wastewater treatment plant of Clermont-Ferrand (central France) twice a month. After concentration, the gene coding the major capsid protein was partially amplified and sequenced by deep-sequencing. Sequences were grouped into OTU, and representative sequences of these OTUs were compared to enterovirus sequences from hospitalized patients during the same period and in the same city.