PRJNA385599
RNA-seq for 30 HapMap CEU samples
Along with phased genotype data for 30 family trios from HapMap project the data from this experiment allows to perform joint estimation of both genetic and parent-of-origin effects in RNA-seq data of 30 children. This framework allows confirming existing imprinted genes as well as finding additional imprinted genes, including partially imprinted genes. Data was collected from 15 males and 15 females in five runs: 10 individuals sequenced in November 2014 with 150 bp paired-end reads, 10 sequenced twice in December 2014 with 150 bp paired-end reads and 10 sequenced twice in January 2015 with most of the reads sequenced with 150bp paired-end reads and another smaller run with 75bp paired-end reads.