Sole10x-WGS
Primary scaffolds for de novo whole genome sequencing of Syzygium oleosum.
Whole genome sequencing and de novo assembly of the Australian rainforest tree, Syzygium oleosum, using 10x Chromium linked reads. Supernova v2 assembly of the data generated a 431 Mb draft genome (10.35% gaps) with a maximum scaffold size of 5.89 Mb, primary scaffold N50 of 976 kb (L50=98) and a primary scaffold BUSCO (v2.0.1 short) completeness estimate of 93.2% (4.5% missing). Pseudodiploid processing of the assembly generated non-redundant alternative scaffolds for 187 Mb (43.3%) of the assembly, with an N50 of 1.94 Mb (L50=30, 13.35% gaps, 65.1% BUSCO complete; 33.2% BUSCO missing).
Whole genome sequencing and de novo assembly of the Australian rainforest tree, Syzygium oleosum, using 10x Chromium linked reads. Supernova v2 assembly of the data generated a 431 Mb draft genome (10.35% gaps) with a maximum scaffold size of 5.89 Mb, primary scaffold N50 of 976 kb (L50=98) and a primary scaffold BUSCO (v2.0.1 short) completeness estimate of 93.2% (4.5% missing). Pseudodiploid processing of the assembly generated non-redundant alternative scaffolds for 187 Mb (43.3%) of the assembly, with an N50 of 1.94 Mb (L50=30, 13.35% gaps, 65.1% BUSCO complete; 33.2% BUSCO missing).