GSE169197
Single-cell RNAseq of the murine intestinal epithelium infected with rotavirus
To understand the impact of murine rotavirus infection on mouse intestinal epithelial tissue, we isolated total intestinal epithelium from uninfected and infected C57Bl6J mice and performed single-cell RNAseq. Overall design: Three C57Bl6J mice were infected with murine rotavirus strain EC and compared to three uninfected C57Bl6J mice. The intestinal epithelium was isolated via FACs and profiled with single-cell RNAseq on the 10x Chromium platform.