Hansen Creek Sockeye RAD Sequencing
Oncorhynchus nerka Restriction Site Associated DNA (RAD) tag sequencing for genotypes
Meiotic maps are a key tool for comparative genomics and association mapping studies.  Next-generation sequencing and genotyping by sequencing are speeding the processes of SNP discovery and the development of new genetic tools, including meiotic maps for numerous species.  Currently there are limited genetic resources for sockeye salmon, Oncorhynchus nerka.  We develop the first dense meiotic map for sockeye salmon using a combination of novel SNPs found in restriction site associated DNA (RAD tags) and SNPs available from existing expressed sequence tag (EST) based assays.