PRJNA858760
Transcriptome of Meloidogyne incognita
The nematodes treated with 0.08 L/mL octanoic acid for 5 min and 10 min were marked as HC1 and HC2 respectively. LC1 and LC2 represent nematodes treated with 0.03 L/mL octanoic acid for 5 h and 10 h, respectively. Meanwhile, there are also two blank control groups corresponding to the high and low concentration treatments, namely CKL and CKH. Extract RNA from all samples representing three biological replicates of each treatment that constituted 18 samples. Total RNA was extracted by using mirVana miRNA Isolation Kit (Thermo Fisher Scientific, New York, USA) according to the manufacturer's protocol. Assessment of the obtained RNA integrity was performed by 1% agarosegel electrophoresis and on the Agilent 2100 BioAnalyzer (Agilent, Santa Clara, CA, USA), meanwhile, RNA concentration and purity was measured on a NanoDrop2000 (Thermo Fisher Scientific).24,25 The cDNA libraries were constructed following the Illumina's library construction protocol, and sequenced using Illumina HiSeq. 2500.