Simultaneous_host_parasite_time_course_analysis_of_mouse_and_the_whipworm_Trichuris_muris_to_identify_candidate_genes_for_host_parasite_interaction-sc-3371
Simultaneous_host_parasite_time_course_analysis_of_mouse_and_the_whipworm_Trichuris_muris_to_identify_candidate_genes_for_host_parasite_interaction
This data is part of a pre-publication release. For information on the proper use of pre-publication data shared by the Wellcome Trust Sanger Institute (including details of any publication moratoria), please see http://www.sanger.ac.uk/datasharing/.   We have generated a detailed time-course of RNA-seq from caecum of mice infected with either a high or low dose of Trichuris muris parasites.  The data will be used to determine gene expression profiles for each gene in both host and parasite over the course of infection, both for chronic and resolved infections. We will identify genes in host and parasite, which are correlated over the time courses more than expected by chance and use these to generate a list of candidates for host parasite interaction.
Using transcriptomics analysis to investigate the mouse and Trichuris muris host-parasite interaction