ena-STUDY-IPK-Gatersleben-17-02-2021-12:08:25:859-935
Assembly of Hordeum vulgare subsp. vulgare cultivar Golden Promise as part of the SHAPE project.
The SHAPE project aims at unraveling the complexity of the barley Pan-Genome (the sum of (i) the core-genome shared in all barley haplotypes and the (ii) dispensable part of the genome found only individual haplotypes). This includes generating additional reference quality genome assemblies and using different NGS-based approaches to monitor small to large scale structural variation and combine with other publicly available sources of barley genome diversity in a high density variation matrix, which will then be tested for its relevance in barley genomic selection breeding programs.  Assembly version v1.0 (originally published by the James Hutton Institute) comprising chromosomes 1H to 7H and yet unplaced scaffolds.
The SHAPE project aims at unraveling the complexity of the barley Pan-Genome (the sum of (i) the core-genome shared in all barley haplotypes and the (ii) dispensable part of the genome found only individual haplotypes). This includes generating additional reference quality genome assemblies and using different NGS-based approaches to monitor small to large scale structural variation and combine with other publicly available sources of barley genome diversity in a high density variation matrix, which will then be tested for its relevance in barley genomic selection breeding programs.  Assembly version v1.0 (originally published by the James Hutton Institute) comprising chromosomes 1H to 7H and yet unplaced scaffolds.