GSE184341
Transcriptomic profiling of bone marrow stromal cell subsets during chronic viral infection with LCMV
RNA sequencing of two stromal cell subsets of the bone marrow, namely CXCL12-abundant reticular cells (CARc) and sinusoidal endothelial cells (SECs) isolated from untreated mice (day 0) and mice infected with Lymphocytic Choriomeningitis Virus cl-13, 56 days after infection (day 56) Overall design: RNA-sequencing of two FACS-sorted mouse bone marrow stromal cells based on phenotypic marker expression from uninfected control (day 0) and LCMV-cl13 infected mice (56 day post infection-day 56). Cell subsets were sorted according to previously defined phenotypic signatres. CARc; CD45-Ter119-Cd31-CD140b+Sca-1- .  SECs; CD45-Ter119-CD31+Sca-1+CD105hi