PRJNA769856
DNA-Seq analysis of beta-lactam-resistant Escherichia coli isolates collected during one year in one community hospital
We used a whole genome sequencing (WGS) approach to capture the plasmid variability found in 97 ESBL positive clinical E. coli (ESBL-Ec) isolated in a German community hospital within one year. By applying 2nd and 3rd generation sequencing techniques, we fully reconstructed 372 plasmids.