GSE160295
miRNA expression profiles of MDA-MB-231 TNBC cells with defected RARalpha serine-77 phosphorylation
microRNAs have been shown to be involved in the pathogenesis of TNBC as important regulators of cell proliferation and apoptosis. However, whether the activation of retinoic acid receptor alpha (RARa), a transcription factor, is involved in mediating transcriptional regulation of microRNAs remains elusive. Here, we investigated the differentially expressed miRNAs in triple negative breast cancer cell line MDA-MB-231 overexpressing a phosphorylation-defective mutant RARaS77A, which mimicked activated RARa, in comparison to non-transfected control cells. Overall design: MDA-MB-231 cells were transfected with lentiviral RARaS77A, a total amount of 3 µg total RNA per sample was used as input material for the small RNA library. Sequencing libraries were generated using NEBNext® Multiplex Small RNA Library Prep Set for Illumina® (NEB, USA.) following the manufacturer's recommendations and index codes were added to attribute sequences to each sample. Non-transfected cells were used as controls, experiments were performed in triplicates.