GSE133480
Comprehensive transcriptome study of salinity stress of salt-tolerant  and sensitive genotypes rice at seedling stage
In order to understand molecular mechanisms of salt stress tolerance in rice several researches have been reported, however there are still unclear processes involved in salt tolerance. For reaching to a better perspective of the molecular mechanisms, we designed a comprehensive transcriptome study consisting contrasting genotypes, different tissues and different sampling time points. Two contrasting genotypes were selected and grown in Yoshida hydroponic medium for 14 days under controlled conditions. For salinity stress half of the seedlings were under 150 mM NaCl and after 6 and 54 h the treated and untreated samples were harvested in three replications from roots and shoots separately Overall design: 48 samples were used for sequencing including two contrasting genotypes (CSR28 and IR28), two treatments (control and 150 mM salinity), two tissues (root and shoot) and two sampling time points (6 h and 54 h) in three biological replications