Dolabrifera dolabrifera Neuronal Transcriptome
Dolabrifera dolabrifera Neuronal Transcriptome
Transcritome analysis from the CNS of Dolabrifera dolabrifera. Total RNA was extracted and cDNA librarie were generated and sequenced using a 454 platform.
Dolabrifera dolabrifera, the warty seacat is an important model to study cellular bases of behavior. However, nearly nothing is known about the molecular organization of this nervous system. Here, using pyrosequencing approach we performed analysis of transcripts expressed in the central nervous system of Dolabrifera. Specifically, we developed a reduced representation sequencing method that can detect low abundant transcripts. Our method greatly reduces the amount of sequencing with more accurate quantification. Basically, sequential addition of adaptors paired with controlled digestion of cDNA generates a one transcript on read type of analysis. Combined 5’ with 3’ targeted libraries produces greater coverage of individual transcripts and high quality assembly.   Our initial analysis allowed us to identify more than 15,000 of neuronal transcripts including a diversity of novel neuropeptides, receptors, ionic channels, transcription factors essential for future analysis of molecular bases of neuronal functions in this model organism.