GSE176129
Integrated molecular analysis identifies new developmental pericyte markers in zebrafish
We performed single cell and bulk RNA-seq analyses on pdgfrb-positive cells to identify candidate pericyte-expressed genes. For bulk RNA-seq, we used wild type pdgfrb-positive samples from Series GSE152759 (GEO ID: GSM4625924, GSM4625925, GSM4625926) for comparison to mutant pdgfrb-positive cells in this Series. These cells had originally been isolated in parallel. Overall design: RNA-seq was performed on transgene-positive cells isolated by FACS.