Genomic epidemiology reveals geographically structured co-circulation of AFR10 and AFR13 Vibrio cholerae lineages driving cholera outbreaks in Tanzania (2022-2024)
Whole-genome sequencing was conducted on 144 *Vibrio cholerae* isolates obtained during cholera outbreaks across 16 regions of Tanzania between 2022 and 2024 archived at the National Public Health Laboratory. The samples were collected as part of outbreak investigations and represent clinical isolates associated with confirmed cholera cases. Sequencing was performed using Oxford Nanopore platforms. The dataset provides genomic data to support investigation of outbreak-associated strains across diverse geographic regions in Tanzania.
Whole-genome sequencing was conducted on 144 *Vibrio cholerae* isolates obtained during cholera outbreaks across 16 regions of Tanzania between 2022 and 2024 archived at the National Public Health Laboratory. The samples were collected as part of outbreak investigations and represent clinical isolates associated with confirmed cholera cases. Sequencing was performed using Oxford Nanopore platforms. The dataset provides genomic data to support investigation of outbreak-associated strains across diverse geographic regions in Tanzania.