Fe and pH effects on Arabidopsis root transcriptome
This study provides RNA-seq data from Arabidopsis thaliana Col-0 root tissues exposed to combinations of iron availability and pH conditions. Plants were grown hydroponically under low (L) and sufficient (W) iron supply (0.1 µM and 10 µM FeHBED) combined with pH 5.5 and 7.5 treatments in a factorial experimental design. Three independent experiments were performed, and root tissues were harvested for strand-specific RNA sequencing using the Illumina NovaSeq platform. Clean reads were mapped to the TAIR10.1 reference genome and processed for gene-level quantification and differential expression analysis. This dataset enables transcriptome-wide analysis of iron- and pH-dependent regulatory responses in Arabidopsis roots.
This study provides RNA-seq data from Arabidopsis thaliana Col-0 root tissues exposed to combinations of iron availability and pH conditions. Plants were grown hydroponically under low (L) and sufficient (W) iron supply (0.1 µM and 10 µM FeHBED) combined with pH 5.5 and 7.5 treatments in a factorial experimental design. Three independent experiments were performed, and root tissues were harvested for strand-specific RNA sequencing using the Illumina NovaSeq platform. Clean reads were mapped to the TAIR10.1 reference genome and processed for gene-level quantification and differential expression analysis. This dataset enables transcriptome-wide analysis of iron- and pH-dependent regulatory responses in Arabidopsis roots.
Ruhr University Bochum