The rhizosphere microbiome analysis for synthetic communities
In this project, we inoculated 3 different synthetic communities to the wheat plant with/without pathogen (Fusarium culmorum) and collected paired metagenome and metatranscriptome data for further analysis. The samples were collected before inoculation (Inoculumn, day0), after 10 days inoculation (day 10) and after 20 days inoculation (day 20). The samples with pathogen were marked as FC, without pathogen were marked as C. Three SynComs were inoculated named SynCom10 (SC10), SynCom11 (SC11), SynCom11_P3 (SC11_P3), for the design of these SynComs see in publication.
In this project, we inoculated 3 different synthetic communities to the wheat plant with/without pathogen (Fusarium culmorum) and collected paired metagenome and metatranscriptome data for further analysis. The samples were collected before inoculation (Inoculumn, day0), after 10 days inoculation (day 10) and after 20 days inoculation (day 20). The samples with pathogen were marked as FC, without pathogen were marked as C. Three SynComs were inoculated named SynCom10 (SC10), SynCom11 (SC11), SynCom11_P3 (SC11_P3), for the design of these SynComs see in publication.
Wageningen university & research