mRNA sequencing of CBCVd-infected and control Humulus lupulus cv. Herkules leaves
mRNA libraries from Humulus lupulus cultivar Herkules plants with natural HLVd background. Half of the plants were additionally infected with CBCVd (Citrus Bark Cracking Viroid) in August/October 2021. Leaf samples were collected during the symptomatic phase in May and August 2023 from four biological pools per treatment group (CBCVd-infected and control). Libraries were prepared using the TruSeq Stranded mRNA kit and sequenced on Illumina NextSeq 550 (150bp PE). This study investigates viroid-host interactions and transcriptome regulation in hop, with a focus on CBCVd-responsive mRNA populations against a persistent HLVd co-infection background. Companion dataset (small RNA): PRJEB110202.
mRNA libraries from Humulus lupulus cultivar Herkules plants with natural HLVd background. Half of the plants were additionally infected with CBCVd (Citrus Bark Cracking Viroid) in August/October 2021. Leaf samples were collected during the symptomatic phase in May and August 2023 from four biological pools per treatment group (CBCVd-infected and control). Libraries were prepared using the TruSeq Stranded mRNA kit and sequenced on Illumina NextSeq 550 (150bp PE). This study investigates viroid-host interactions and transcriptome regulation in hop, with a focus on CBCVd-responsive mRNA populations against a persistent HLVd co-infection background. Companion dataset (small RNA): PRJEB110202.
University of Hohenheim