the genome assembly of Pedicularis variegata
Pedicularis L. (Orobanchaceae) is a large hemiparasitic herb genus of north temperate region, representing one of the most diverse taxa in situ diversification in the Himalaya-Hengduan mountains. In this study, we report a haplotype-resolved, chromosome-level genome assembly of the diploid P. variegata, generated by PacBio high fidelity (HiFi) long reads and high-throughput chromosome conformation capture (Hi-C) data. The assembled two haplotype genome spans 1.75Gb and 1.66Gb, with the scaffold N50 to 221.99Mb and 218.84Mb.
Pedicularis L. (Orobanchaceae) is a large hemiparasitic herb genus of north temperate region, representing one of the most diverse taxa in situ diversification in the Himalaya-Hengduan mountains. In this study, we report a haplotype-resolved, chromosome-level genome assembly of the diploid P. variegata, generated by PacBio high fidelity (HiFi) long reads and high-throughput chromosome conformation capture (Hi-C) data. The assembled two haplotype genome spans 1.75Gb and 1.66Gb, with the scaffold N50 to 221.99Mb and 218.84Mb.
Kunming Institute of Botany, Chinese Academy of Sciences